Indrops config 2 An example for running the OneCellPipe pipeline of OneCellBio with a pre-defined configuration file for sequencing runs with a single part, and a single library. Files: R1.fastq.gz R2.fastq.gz Command line: nextflow onecellpipe.nf…
Running the OneCellPipe software in the Amazon cloud This is a sub-page of the multi-page documentation for the OneCellPipe pipeline of OneCellBio. Here are more detailed instruction for running OneCellPipe on an single machine in the…
Installing the software required for the OneCellPipe system Here are more detailed instruction for installing and running the OneCellPipe software and its requirements. These instructions are for a Linux Ubuntu system where…
