Skip to content
Bioinformatics work notes
Bioinformatics work notes
an external memory extension…
  • Home
  • Contact
  • About
Bioinformatics work notes

Category: bioinformatics

Life as a Bioinformatics Freelancer: Finding work

Posted September 20, 2018January 7, 2020Posted in bioinformatics, freelancing

Some ideas for bioinformatics freelancers to find work and advertise themselves to the world.

Using Container Software

Posted April 18, 2018March 29, 2020Posted in bioinformatics, container, software, technology, unix

Docker and Singularity are very appealing software systems to run different operating systems or reproducible analysis steps by using “containers”. Here is a quick intro to get you started.

RNA-Seq data quality scores

Posted December 13, 2017March 29, 2020Posted in bioinformatics, sequencing

There are different ways to encode the quality scores in FASTQ files from Next-generation sequencing machines. This is important to find out before using the data and to convert between formats if necessary.

The CCDS project

Posted December 13, 2017December 13, 2017Posted in bioinformatics, genome informatics

The CCDS project tries to identify a core set of human and mouse protein coding regions in a stable manner.

Genomic Start Coordinates

Posted December 13, 2017March 29, 2020Posted in bioinformatics, genome informatics

There is always confusion about different notations of the start coordinates of genomic features between different genome browsers and file formats.

Posts navigation

Previous 1 2 3 4 Next

Tags

0-based 1-based automation AWS bioinformatics freelancing series BlueFuse chromosome-counting cloud coding frame compress image compression consulting container coordinate system coverage docker EC2 gene annotation Human genome IVF load time NGS operating system PGS PGT-A price QC quality quality control S3 script sharing singularity sqlite telomere Website optimization
© Dr. Felix Kokocinski, 2018    |    About / Impressum    |    Powered by WordPress    |    Base-theme: Sydney.